awchild | RCDS Data Repository

Data Access from NCBI | Artemisia tridentata subsp. tridentata drought GxE experiment transcriptomics data

Boise State University,Idaho EPSCoR,EPSCoR GEM3

Artemisia tridentata subsp. tridentata drought GxE experiment transcriptomics data

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UPstream Regional LiDAR Model for Extent of Trout (UPRLIMET) model training and prediction data

Idaho EPSCoR,EPSCoR GEM3

We present a novel model development and evaluation framework, wherein we compare 26 models to predict upper distribution limits of trout in streams in Oregon using observational data collected in 2017. The models used machine learning, logistic...

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Data processing scripts for: A Genotype×Environment experiment reveals contrasting response strategies to drought between populations of a keystone species (Artemisia tridentata; Asteraceae)

Boise State University,Idaho EPSCoR,EPSCoR GEM3

Life Science

This repo is for scripts to process and analyze data as described in Melton et al., 2023 (Plant-Environment Interactions, DOI: https://doi.org/10.1002/pei3.10119) Raw data associated with these scripts are available from NCBI SRA from BioProject...

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Script Access | Data processing scripts for: A Genotype×Environment experiment reveals contrasting response strategies to drought between populations of a keystone species (Artemisia tridentata; Asteraceae)

Boise State University,Idaho EPSCoR,EPSCoR GEM3

Data processing scripts for: A Genotype×Environment experiment reveals contrasting response strategies to drought between populations of a keystone species (Artemisia tridentata; Asteraceae)

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Supplemental scripts from: Meta-Analysis Reveals Challenges and Gaps for Genome-to-Phenome Research Underpinning Plant Drought Response

Boise State University,Idaho EPSCoR,EPSCoR GEM3

Tools & Code

Supplemental scripts for analyses that follow text mining using the G2PMineR R package. [v1.0.0](https://github.com/aemelton/G2PMineR_Supplemental_Scripts/releases/tag/v1.0.0) utilized within associated peer reviewed manuscript in International...

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Code from: Using Decision Analysis to Determine the Feasibility of a Conservation Translocation

Idaho EPSCoR,EPSCoR GEM3

Life Science

Tools & Code

This code was used for a northern Idaho northern leopoard frog reintroduction feasability analysis. It can be quite cumbersome to run - the current version is intended to be run using parallel computing and can take several days/weeks to run. For...

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Code and data for structural equation model of beargrass growth

Idaho State University,Idaho EPSCoR,EPSCoR GEM3

Fire Science

Life Science

Data and code files used for analyses in Indigenous caretaking of beargrass and the social and ecological consequences of adaptations to maintain beargrass weaving practices Hart-Fredeluces, G. M., M. Burnham, M. Blaich Vaughan, G. Hart, J. A....

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Code from: Simulating plasticity as a framework for understanding habitat selection and its role in adaptive capacity and extinction risk through an expansion of CDMetaPOP (3_site_ABM)

Idaho EPSCoR,EPSCoR GEM3

Life Science

Tools & Code

ABM files at Jacks, Keithly/Mann, and Dry creeks to demonstrate the CDMetaPOP behavioral plasticity: habitat selection module. *Directory information*: inputs: CDMetaPOP input files for the creeks. outputs available by request, but too large for...

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Data and Code from: Post-fire seed dispersal of a wind-dispersed shrub declined with distance to seed source, yet had high levels of unexplained variation (capplestein/Sagebrush-Seed-Dispersal: v.1)

Idaho EPSCoR,EPSCoR GEM3

Life Science

Code for AoB paper: "Post-fire seed dispersal of a wind-dispersed shrub declined with distance to seed source, yet had high levels of unexplained variation" This repository includes code needed to replicate the models in the paper, including the...

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Meta-analysis reveals challenges and gaps for genome-to-phenome research underpinning plant drought response

Boise State University,Idaho EPSCoR,EPSCoR GEM3

Life Science

Tools & Code

Data used to identify species occurring in hyperarid environments for analyses described in "Meta-analysis reveals challenges and gaps for genome-to-phenome research underpinning plant drought response." The "PlantsLackingHumanUse_PrelimQCd_Data....

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awchild's content

Data Access from NCBI | Artemisia tridentata subsp. tridentata drought GxE experiment transcriptomics data

UPstream Regional LiDAR Model for Extent of Trout (UPRLIMET) model training and prediction data

Data processing scripts for: A Genotype×Environment experiment reveals contrasting response strategies to drought between populations of a keystone species (Artemisia tridentata; Asteraceae)

Script Access | Data processing scripts for: A Genotype×Environment experiment reveals contrasting response strategies to drought between populations of a keystone species (Artemisia tridentata; Asteraceae)

Supplemental scripts from: Meta-Analysis Reveals Challenges and Gaps for Genome-to-Phenome Research Underpinning Plant Drought Response

Code from: Using Decision Analysis to Determine the Feasibility of a Conservation Translocation

Code and data for structural equation model of beargrass growth

Code from: Simulating plasticity as a framework for understanding habitat selection and its role in adaptive capacity and extinction risk through an expansion of CDMetaPOP (3_site_ABM)

Data and Code from: Post-fire seed dispersal of a wind-dispersed shrub declined with distance to seed source, yet had high levels of unexplained variation (capplestein/Sagebrush-Seed-Dispersal: v.1)

Meta-analysis reveals challenges and gaps for genome-to-phenome research underpinning plant drought response