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University of Idaho
University of Idaho

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Learn more at https://www.uidaho.edu

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Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon

Life Science

This repository contains all the scripts used to run GEA analyses, Neighbor-joining analysis, and create environmental datasets in Alshwairikh et al. 2021

Environmental data and allele frequency matrix are available on Dryad: https://doi.org/10.5061/dryad.prr4xgxmn

Data Use
License
None Specified
Recommended Citation
Alshwairikh YA, Kroeze SL, Olsson J, Stephens-Cárdenas SA, Swain WL, Waits LP, Horn RL, Narum SR, Seaborn T. 2022. Code from: Influence of Environmental Conditions at Spawning Sites and Migration Routes on Adaptive Variation and Population Connectivity in Chinook Salmon. GitHub. https://github.com/YaraAlshw/LG_Chinook

Funding
US National Science Foundation and Idaho EPSCoR: OIA-1757324
Bonneville Power Administration: BPA 2008-907-00

bioinformatics
genomics
wildlife
chinook salmon (Oncorhynchus tshawytscha)
genome-environment associations (GEA)
FieldValue
Modified
2023-08-30
Release Date
2022-05-24
Publisher
University of Idaho
Idaho EPSCoR
EPSCoR GEM3
Identifier
6a13098d-b7dd-4702-a63c-9b1e14ba85a1
Spatial / Geographical Coverage Area
POLYGON ((-124.4646692276 44.943633857843, -124.4646692276 48.270083097169, -116.40890926123 48.270083097169, -116.40890926123 44.943633857843))
Spatial / Geographical Coverage Location
Columbia River Basin USA
Language
English (United States)
License
None Specified
Author
Yara Alshwairikh, Shayla Kroeze, Jenny Olsson, Steve Stephens-Cardenals, William Swain, Lisette Waits, Rebekah Horn, Shawn Narum and Travis Seaborn
Contact Name
Yara Alshwairikh
Contact Email
yara.alshwairikh@gmail.com
Public Access Level
Public
Related Content: 
Peer Reviewed Manuscript-Ecology and Evolution
Associated environmental data and allele frequency matrix | Dryad
Data available on:: 
Friday, June 17, 2022