Title: Annotations from: Artemisia tridentata subsp. tridentata drought GxE experiment transcriptomics data-BioProject PRJNA934360
	DOI: 10.7923/h898-2606

Data, code and/or products within this dataset support the following manuscript:
	Manuscript Title: Phenotypic trait variation and differential gene expression characterize the response of Artemisia tridentata (big sagebrush; Asteraceae) to drought stress
	Journal: Plant-Environment Interactions
	DOI: In Review

Description/Abstract:
	The data set contains the transcript annotations for the assembled IDT3 transcriptome. The trinotate annotation file provides an assembled transcript ID, gene name, how the gene was identified (the trinotate pipeline contains several methods of gene identification), and gene ontology information. The accompanying BAM alignment files contain the read mapping data for transcriptome samples used in the differential gene expression experiment. Raw read, BAM alignment and assembled IDT3 transcriptome data files are available from the NCBI SRA database as part of BioProject PRJNA934360.

	**Data Use**:
	*License*: [CC0](https://creativecommons.org/publicdomain/zero/1.0/legalcode)   
	*Recommended Citation*: Melton AE, Moran K, Martinez P, Ellestad P, Milliken E, Morales W, Child AW, Richardson BA, Serpe M, Novak SJ, Buerki S. 2023. Annotations from: Artemisia tridentata IDT3 RNASeq transcriptome BioProject PRJNA934360 (Version 0.1) [Data set]. University of Idaho. https://doi.org/10.7923/h898-2606

	**Ancillary Data**: [NCBI BioProject PRJNA934360](https://www.ncbi.nlm.nih.gov/bioproject/PRJNA934360)

Resource URL: https://data.nkn.uidaho.edu/dataset/annotations-artemisia-tridentata-subsp-tridentata-drought-gxe-experiment-transcriptomics

Creator(s):	
	1. Anthony E. Melton
		ORCID: https://orcid.org/0000-0003-4882-6664
		Affiliation: Department of Biological Sciences; Boise State University
	2. Kara Moran
		ORCID: NULL
		Affiliation: Department of Biological Sciences; Boise State University 
	3. Peggy Martinez
		ORCID: https://orcid.org/0000-0001-5043-6839
		Affiliation: Department of Biological Sciences; Boise State University
	4. Paige Ellestad
		ORCID: https://orcid.org/0000-0003-3930-3239
		Affiliation: Department of Biological Sciences; Boise State University
	5. Erin Milliken
		ORCID: NULL
		Affiliation: Department of Biological Sciences; Boise State University
	6. Walker Morales
		ORCID: NULL
		Affiliation: Department of Biological Sciences; Boise State University
	7. Andrew Wright Child
		ORCID: https://orcid.org/0000-0001-6666-0739
		Affiliation: Research Computing and Data Services; University of Idaho
	8. Bryce A. Richardson
		ORCID: https://orcid.org/0000-0001-9521-4367
		Affiliation: USDA Forest Service, Rocky Mountain Research Station
	9. Marcelo Serpe
		ORCID: NULL
		Affiliation: Department of Biological Sciences; Boise State University
	10. Stephen J. Novak
		ORCID: https://orcid.org/0000-0002-0537-7953
		Affiliation: Department of Biological Sciences; Boise State University
	11. Sven Buerki
		ORCID: https://orcid.org/0000-0002-8299-6539
		Affiliation: Department of Biological Sciences; Boise State University

Other Contributor(s): 
	1. Full Name: Andrew Wright Child
	 	Unique identifier: https://orcid.org/0000-0001-6666-0739
		Affiliation(s): Research Computing and Data Services; University of Idaho
		Role: data manager

Publisher: University of Idaho

Publication Year: 2023
	
Language(s): American English

Subject(s):
	1. NATURAL SCIENCES
		1.6 Biological Sciences

Keywords/Tags: RNAseq; Artemisia tridentata (sagebrush); bioinformatics; ecology; genomics; transcriptome; annotations

Resource Type General: Dataset
		
Dates: NULL	

Date available for the public: 2023-12-31 or upon publication 

Sizes: 587 MB (48 MB-Compressed)
 
Format(s): text/tab-separated-values
 
Version: 0.1

Funding References:
	US NSF Idaho EPSCOR OIA-1757324
		https://www.nsf.gov/awardsearch/showAward?AWD_ID=1757324
		RII Track-1: Linking Genome to Phenome to Predict Adaptive Responses of Organisms to Changing Landscapes
	Dovetail Genomics 
		Tree of Life Award
 
Spatial/Geographical Coverage Location: 
	Study Area Description: Sagebrush steppe ecosystems in Idaho and Utah USA
	Geospatial Extent:
		West: -116.9641
		East: -109.3876
		North: 43.3366
		South: 38.306
	Point Location(s): 
		IDT3 Mother Plant: -116.9641, 43.3366
		UTT2 Mother Plant: -109.3876, 38.306
 
Temporal Coverage: 
	Start Data: 2019-07-10
	End Date: 2022-12-31
 
Granularity of the Data: NULL
 
Contact Info: 
	Contact Name: Sven Buerki
	Contact Email: svenbuerki@boisestate.edu
 
Related Content: 
	Sagebrush Genome Project Website | https://sagebrushgenome.org/
	Sagebrush Genome Project GitHub | https://svenbuerki.github.io/Sagebrush_Genome_Project/
	Peer Reviewed Manuscript-Plant-Environment Interactions | ###DOI Link once accepted

Data/Code Files:
	readme.txt
	Trinotate.tsv	 	