{"help":"Return the metadata of a dataset (package) and its resources. :param id: the id or name of the dataset :type id: string","success":true,"result":[{"id":"e1e45a9e-75ec-4200-abba-aa2239cd1e9f","name":"haploid-pseudo-chromosome-genome-assembly-keystone-sagebrush-species-artemisia-tridentata","title":"A haploid pseudo-chromosome genome assembly for a keystone sagebrush species (Artemisia tridentata) of western North American rangelands","author":"Anthony E. Melton, Andrew W. Child, Carlos Dave C. Dumaguit, Jennifer S. Forbey, Matthew Germino, Marie-Anne de Graaf, Andrew Kliskey, Peggy Martinez, Stephen J. Novak, Bryce A. Richardson, Marcelo Serpe, Sven Buerki","author_email":"svenbuerki@boisestate.edu","maintainer":"RCDS Data Repository","maintainer_email":"rcds-web@uidaho.edu","notes":"\u003Cp\u003EPseudo-chromosome level reference genome assembly for Artemisia tridentata. Sequence data for Artemisia tridentata to support the following Genome Report published in \u003Cem\u003E\u003Ca href=\u0022https:\/\/doi.org\/10.1093\/g3journal\/jkac122\u0022\u003EG3\u003C\/a\u003E\u003C\/em\u003E\u003C\/p\u003E\n\u003Cp\u003EAll sequence data for this project are available from the National Center for Biotechnology Information (NCBI) under BioProject accession number PRJNA795150 and BioSample accession number SAMN24662005. The Whole Genome Shotgun project has been deposited at DDBJ\/ENA\/GenBank under the accession JAKJXK000000000. All raw sequence files are available from the NCBI SRA database (PacBio long read data SRR17863255 Omni-C proximity-ligation data SRR17863200, SRR17870744 and SRR17870745; Illumina HiSeq short read data SRR17870775 and SRR17863368; RNASeq paired end reads from leaf tissue SRR17779362; RNASeq paired end reads from root tissue SRR17779361).\u003C\/p\u003E\n\u003Cp\u003EGenome annotation results and supporting data files are openly available via the G3 Figshare repository at \u003Ca href=\u0022https:\/\/doi.org\/10.25387\/g3.19651260.v1\u0022\u003Ehttps:\/\/doi.org\/10.25387\/g3.19651260.v1\u003C\/a\u003E. All software used in this work is in the public domain, with parameters being clearly described in Methods section of the associated Genome Report. If parameters were not detailed for a software, default parameters were used as suggested by the developer.\u003C\/p\u003E\n\u003Cp\u003E\u003Cstrong\u003EData Use\u003C\/strong\u003E\u003Cbr \/\u003E\n\u003Cem\u003ELicense\u003C\/em\u003E\u003Cbr \/\u003E\nCreative Commons Public Domain Dedication and Certification (\u003Ca href=\u0022https:\/\/creativecommons.org\/licenses\/publicdomain\/\u0022\u003ECC-PDDC\u003C\/a\u003E)\u003Cbr \/\u003E\n\u003Cem\u003ERecommended Citation\u003C\/em\u003E\u003Cbr \/\u003E\nMelton AE, Child AW, Dumaguit CDC, Forbey JS, Germino M, de Graaf M, Kliskey A, Martinez P, Novak SJ, Richardson BA, Serpe M, Buerki S. 2022. A haploid pseudo-chromosome genome assembly for a keystone sagebrush species (Artemisia tridentata) of western North American rangelands [Dataset]. National Center for Biotechnology Information. \u003Ca href=\u0022https:\/\/www.ncbi.nlm.nih.gov\/bioproject\/PRJNA795150\u0022\u003Ehttps:\/\/www.ncbi.nlm.nih.gov\/bioproject\/PRJNA795150\u003C\/a\u003E\u003C\/p\u003E\n\u003Cp\u003E\u003Cstrong\u003EFunding\u003C\/strong\u003E\u003Cbr \/\u003E\nUS National Science Foundation and Idaho EPSCoR: OIA-1757324\u003C\/p\u003E\n","url":"https:\/\/data.nkn.uidaho.edu\/dataset\/haploid-pseudo-chromosome-genome-assembly-keystone-sagebrush-species-artemisia-tridentata","state":"Active","log_message":"Edited by awchild.","private":true,"revision_timestamp":"Wed, 08\/30\/2023 - 13:17","metadata_created":"Thu, 05\/26\/2022 - 09:48","metadata_modified":"Wed, 08\/30\/2023 - 13:17","creator_user_id":"6cc16f2c-77c2-4d12-ac06-56bbb86b535b","type":"Dataset","resources":[{"id":"cbf6c745-02e2-4b91-978a-3a3c2d0d411c","revision_id":"","url":"https:\/\/www.ncbi.nlm.nih.gov\/bioproject\/PRJNA795150","description":"","format":"html","state":"Active","revision_timestamp":"Wed, 08\/30\/2023 - 12:25","name":"Data Access via NCBI | A haploid pseudo-chromosome genome assembly for a keystone sagebrush species (Artemisia tridentata) of western North American rangelands","mimetype":"html","size":"","created":"Thu, 05\/26\/2022 - 10:12","resource_group_id":"bff301ea-b742-427b-954e-e6a326c2ea45","last_modified":"Date changed Wed, 08\/30\/2023 - 12:25"}],"tags":[{"id":"7268fffa-e4c5-417c-b5d5-fa1451ad1e9b","vocabulary_id":"2","name":"genome"},{"id":"0ac2956f-279c-4946-84a0-1c06a981fad3","vocabulary_id":"2","name":"genome size"},{"id":"00939bbf-4b50-4578-ab2e-3b3ad4f2b131","vocabulary_id":"2","name":"flow cytometry"},{"id":"b4ff74fb-9957-4c34-bf1f-a832b8d8a494","vocabulary_id":"2","name":"DNA"},{"id":"3222d7db-289e-45c9-abd9-e085e5fec27a","vocabulary_id":"2","name":"transcriptome"},{"id":"542df88f-4cfb-441c-94d7-d73aa882f974","vocabulary_id":"2","name":"sequence assembly"},{"id":"1978a150-5bdc-49ed-819c-e43b9b9d9837","vocabulary_id":"2","name":"in vitro tissue culture"},{"id":"c32f6941-b954-4e1e-a3a0-4edd528087aa","vocabulary_id":"2","name":"DNA sequencing"},{"id":"7815909d-6f25-495e-ace8-5ee4f1954a64","vocabulary_id":"2","name":"RNA sequencing"},{"id":"9072c2ce-524a-4531-85ee-14c514af8b38","vocabulary_id":"2","name":"sequence assembly process"},{"id":"44441400-069d-464e-9fb5-92ff1a0b32af","vocabulary_id":"2","name":"keystone species"},{"id":"14ee4fda-6c18-428a-a23c-c7e97084ac9b","vocabulary_id":"2","name":"genomic resources"}],"groups":[{"description":"\u003Cp\u003EBoise State University is a Carnegie-classified doctoral research university and our students have opportunities to work with talented and accomplished faculty on research, even as undergraduates. Our students go into the workforce better prepared, with expertise outside of their major by taking advantage of opportunities such as certificates in business anthropology, entrepreneurship, or cybersecurity. \u003C\/p\u003E\n\u003Cp\u003ELearn more at \u003Ca href=\u0022https:\/\/www.boisestate.edu\/\u0022\u003Ehttps:\/\/www.boisestate.edu\/\u003C\/a\u003E\u003C\/p\u003E\n","id":"bff301ea-b742-427b-954e-e6a326c2ea45","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/bsu_logo.jpg","title":"Boise State University","name":"group\/boise-state-university"},{"description":"\u003Cp\u003EThe primary objective of Idaho EPSCoR is to stimulate research in niche areas that can become fully competitive in the disciplinary and multidisciplinary research programs of the National Science Foundation and other relevant agencies. Idaho EPSCoR provides support for sustainable increases in Research and Development capacity and advances science and engineering capabilities within the state. \u003C\/p\u003E\n\u003Cp\u003EVisit them at \u003Ca href=\u0022https:\/\/www.idahoepscor.org\u0022\u003Ehttps:\/\/www.idahoepscor.org\u003C\/a\u003E\u003C\/p\u003E\n","id":"e696b239-9ecb-412e-b032-03a75b2b9fd6","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/Idaho_epscor_logo_no_white_background.png","title":"Idaho EPSCoR","name":"group\/idaho-epscor"},{"description":"\u003Cp\u003EGEM3 is an NSF EPSCoR research program seeking to understand how genetic diversity and phenotypic plasticity affect species response to environmental change, shaping both population response and adaptive capacity.\u003C\/p\u003E\n\u003Cp\u003EVisit them at: \u003Ca href=\u0022https:\/\/www.idahogem3.org\u0022\u003Ehttps:\/\/www.idahogem3.org\u003C\/a\u003E\u003C\/p\u003E\n","id":"1812a312-11a4-492d-960b-9a78b4abfe0c","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/GEM3_nov5_logo.png","title":"EPSCoR GEM3","name":"group\/epscor-gem3"}]}]} Error | RCDS Data Repository

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