{"help":"Return the metadata of a dataset (package) and its resources. :param id: the id or name of the dataset :type id: string","success":true,"result":[{"id":"a4da2648-e804-4b65-97e9-ca209e203025","name":"sagebrush-population-genetics-analysis-pipeline","title":"Sagebrush population genetics analysis pipeline","author":"Lukas Grossfurthner","author_email":"gros3875@vandals.uidaho.edu","maintainer":"RCDS Data Repository","maintainer_email":"rcds-web@uidaho.edu","notes":"\u003Cp\u003EThis repository hosts data and code for the population genetic analyses performed in Grossfurthner et al. (2023) Population structure and hybridization under contemporary and future climates in a heteroploid foundational shrub species (Artemisia tridentata).\u003C\/p\u003E\n\u003Cp\u003EThis project aimed to identify the distinctiveness of Artemisia tridentata subspecies as well as the detection of hybridization. To this end, we sampled five transects throughout the western United States where a subspecies overlap was predicted using subspecies-specific climate niche models. Along each transect, we sampled multiple plots representing the parental and the potential hybrid habitats. We performed reduced representation sequencing and processed the data using a ploidy-informed genotyping approach. Here, I provide the basic codes used for the analyses of the heteroploid data. Additional analyses, annotations and bug-fixes will follow soon.\u003C\/p\u003E\n\u003Cp\u003E\u003Cstrong\u003EData Use\u003C\/strong\u003E\u003Cbr \/\u003E\n\u003Cem\u003ELicense\u003C\/em\u003E\u003Cbr \/\u003E\nNone specified\u003Cbr \/\u003E\n\u003Cem\u003ERecommended Citation\u003C\/em\u003E\u003Cbr \/\u003E\nGrosfurthner L. 2023. Sagebrush population genetics analysis pipeline [Dataset]. GitHub. \u003Ca href=\u0022https:\/\/github.com\/LukeBotanist\/Sagebrush\/\u0022\u003Ehttps:\/\/github.com\/LukeBotanist\/Sagebrush\/\u003C\/a\u003E\u003C\/p\u003E\n\u003Cp\u003E\u003Cstrong\u003EFunding\u003C\/strong\u003E\u003Cbr \/\u003E\nUS National Science Foundation and Idaho EPSCoR: OIA-1757324\u003C\/p\u003E\n","url":"https:\/\/data.nkn.uidaho.edu\/dataset\/sagebrush-population-genetics-analysis-pipeline","state":"Active","log_message":"Edited by awchild.","private":true,"revision_timestamp":"Thu, 09\/28\/2023 - 14:50","metadata_created":"Thu, 09\/28\/2023 - 14:36","metadata_modified":"Thu, 09\/28\/2023 - 14:50","creator_user_id":"6cc16f2c-77c2-4d12-ac06-56bbb86b535b","type":"Dataset","resources":[{"id":"ee8d7847-9f18-47ea-9c15-879a7a4d2007","revision_id":"","url":"https:\/\/github.com\/LukeBotanist\/Sagebrush\/","description":"","format":"data","state":"Active","revision_timestamp":"Thu, 09\/28\/2023 - 14:46","name":"Data and Code Access via GitHub | Sagebrush population genetics analysis pipeline","mimetype":"data","size":"","created":"Thu, 09\/28\/2023 - 14:37","resource_group_id":"89a02fc8-c98e-44bb-9d3e-2d3d0849fbca","last_modified":"Date changed Thu, 09\/28\/2023 - 14:46"}],"tags":[{"id":"bfd62175-0785-4c6b-ad66-b98ab6501123","vocabulary_id":"2","name":"Artemisia tridentata (sagebrush)"},{"id":"5f859265-7d19-47f5-a15e-0e22846d565a","vocabulary_id":"2","name":"adaptation"},{"id":"894c23dc-0fe9-49c8-841c-051424e70b40","vocabulary_id":"2","name":"bioinformatics"},{"id":"425f965a-f839-486d-be20-95827298c8c0","vocabulary_id":"2","name":"ecology"},{"id":"5ae05940-dfb2-465d-b0c6-80250a5613c9","vocabulary_id":"2","name":"genome to phenome"},{"id":"9d10045c-9469-4162-99d1-4a4bf8a3c1f0","vocabulary_id":"2","name":"genomics"},{"id":"f9dc982f-66d8-4014-a864-663fc3abfcda","vocabulary_id":"2","name":"ddRAD"},{"id":"5ec94e43-975a-4c56-a146-cf115c4be7ae","vocabulary_id":"2","name":"ecotone"}],"groups":[{"description":"\u003Cp\u003ESince 1889, the University of Idaho has provided motivated students with a transformative higher education experience that prepares them to solve real-world problems and achieve success in their lives and careers.\u003C\/p\u003E\n\u003Cp\u003ELearn more at \u003Ca href=\u0022https:\/\/www.uidaho.edu\u0022\u003Ehttps:\/\/www.uidaho.edu\u003C\/a\u003E\u003C\/p\u003E\n","id":"89a02fc8-c98e-44bb-9d3e-2d3d0849fbca","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/UI_Main_horizontal_4c.jpg","title":"University of Idaho","name":"group\/university-idaho"},{"description":"\u003Cp\u003EThe primary objective of Idaho EPSCoR is to stimulate research in niche areas that can become fully competitive in the disciplinary and multidisciplinary research programs of the National Science Foundation and other relevant agencies. Idaho EPSCoR provides support for sustainable increases in Research and Development capacity and advances science and engineering capabilities within the state. \u003C\/p\u003E\n\u003Cp\u003EVisit them at \u003Ca href=\u0022https:\/\/www.idahoepscor.org\u0022\u003Ehttps:\/\/www.idahoepscor.org\u003C\/a\u003E\u003C\/p\u003E\n","id":"e696b239-9ecb-412e-b032-03a75b2b9fd6","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/Idaho_epscor_logo_no_white_background.png","title":"Idaho EPSCoR","name":"group\/idaho-epscor"},{"description":"\u003Cp\u003EGEM3 is an NSF EPSCoR research program seeking to understand how genetic diversity and phenotypic plasticity affect species response to environmental change, shaping both population response and adaptive capacity.\u003C\/p\u003E\n\u003Cp\u003EVisit them at: \u003Ca href=\u0022https:\/\/www.idahogem3.org\u0022\u003Ehttps:\/\/www.idahogem3.org\u003C\/a\u003E\u003C\/p\u003E\n","id":"1812a312-11a4-492d-960b-9a78b4abfe0c","image_display_url":"https:\/\/data.nkn.uidaho.edu\/sites\/default\/files\/GEM3_nov5_logo.png","title":"EPSCoR GEM3","name":"group\/epscor-gem3"}]}]} Error | RCDS Data Repository

Error

The website encountered an unexpected error. Please try again later.